LLUÍS GIMÉNEZ GABARRÓ
Barcelona
Summary
I consider myself a highly proactive individual, always looking for new challenges and opportunities to take my career to the next level in Computer-Aided Drug Design (CADD), structural bioinformatics, and Machine Learning. I could not be more convinced that those are the domains where I can exploit my full potential.
Overview
3
3
years of professional experience
Work History
Computational Chemist & AI Scientist
Nostrum BioDiscovery
09.2023 - Current
- Focused on the integration of Molecular Modeling and AI tools to identify novel degrader molecular glues, that outperform current candidates.
- Proficient in system and ligand preparation with Glide from Schrödinger, molecular docking, Protein Energy Landscape Exploration (PELE) simulations, and utilizing generative models (LSTM variational autoencoders) and transformer graph networks for novel compound generation and prediction of docking/PELE scores.
Bioinformatics and Systems Biology
Made Of Genes
07.2022 - 09.2022
- Specialized in the creation of an automatized algorithm that creates dynamic petitioners with DocuSign and stores them in a docker.
- Understanding of the MoG workflow, detection of bugs, and proposal of alternatives to increase the efficiency of the algorithms used.
Bioinformatics Analysis Services
Josep Carreras Leukemia Research Institute
07.2021 - 09.2021
- .Focused on research of COVID-19 epigenetics alongside Manel Esteller's group.
- Proficient in the differential methylation analysis pipeline including quality control, filtering, normalization, data exploration, and statistical testing for probe-wise differential methylation.
- Beta-Tester for "VisualMethyl".
Education
Bioinformatics Bachelor's Degree -
UNIVERSITAT POMPEU FABRA (ESCI-UPF)
06-2024
Biotechnology bachelor's degree -
UNIVERSITAT AUTONOMA DE BARCELONA (UAB)
06-2023
Primary, Secondary, and High School Education -
LA FARGA, PRIVATE SCHOOL
06-2018
Skills
- Programming: Python, R, SQL, BASH
- Molecular Modelling: Glide (Schrödinger), Maestro, GROMACS, PyMol, molecular docking, PELE, Monte Carlo simulation
- AI: TensorFlow, Keras, PyTorch
- Soft skills: Adaptability, communication, critical thinking, teamwork, time management, work ethic, professionalism, empathy
Accomplishments
- English C1 level: Certificate in Advanced English (CAE) with a grade of 182 out of 210.
- Completion of Kumon course (2003-2018), Japanese method consisting of solving daily math exercises (which provides students the skills and mindset for learning new materials without being directly taught).
- Stages abroad (2012 and 2013): Stayed with a family in Ireland while studying at an Irish secondary school for three months.
Timeline
Computational Chemist & AI Scientist
Nostrum BioDiscovery
09.2023 - Current
Bioinformatics and Systems Biology
Made Of Genes
07.2022 - 09.2022
Bioinformatics Analysis Services
Josep Carreras Leukemia Research Institute
07.2021 - 09.2021
Bioinformatics Bachelor's Degree -
UNIVERSITAT POMPEU FABRA (ESCI-UPF)
Biotechnology bachelor's degree -
UNIVERSITAT AUTONOMA DE BARCELONA (UAB)
Primary, Secondary, and High School Education -
LA FARGA, PRIVATE SCHOOL
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